Well, the problem is almost certainly something to do with the NoPIA feature of .NET 4.0 (see e.g. this summary of a PDC talk). I don't know to what extent F# is supposed to support NoPIA, so the behavior you're seeing might be expected (but unfortunate), or might be a bug...
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So I have experienced the following (undesired) strange behavior, and I would like to understand why.
I create a new VS2010 F# project and add a reference to Microsoft.Office.Tools.Excel. Now if I create an object of type Microsoft.Office.Tools.Excel.ControlCollection and look at its interface, I see all the things listed here.
Great, that's exactly what I want.
Now I add a new reference, this time to Microsoft.Office.Tools.Excel.v4.0.Utilities and go and look at that same object again. Suddenly it has a different interface (including one name-mangled function called _VtblGap1_5). What the heck is going on here?
Also worth noting: I tried making a C# project with references to both of these, and I don't have this problem.